Transcript: Zscan18-001 OTTMUST00000148474.1

Description

zinc finger and SCAN domain containing 18

Location

About this transcript

This transcript has 7 exons and is annotated with 21 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Zscan18-001	OTTMUST00000148474.1	3709	809aa	OTTMUSP00000077171	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52021	E9PUD6
Zscan18-005	OTTMUST00000148504.1	3668	809aa	OTTMUSP00000077186	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52021	E9PUD6
Zscan18-004	OTTMUST00000148506.1	629	87aa	OTTMUSP00000077187	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A1B0GRW2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Zscan18-002	OTTMUST00000148503.1	1969	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Zscan18-003	OTTMUST00000148505.1	552	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 3,709 bps Translation length: 809 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52021

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 24/11/2015 (Created on 24/11/2015)

Alternative symbols

RP23-74O12.4-001

Other assemblies

This transcript maps to 12,768,092-12,780,654 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000211392

Curation Method

Manual annotation from Havana