Transcript: Pkd1l3-003 OTTMUST00000151112.1

Description

polycystic kidney disease 1 like 3

Location

About this transcript

This transcript has 16 exons and is annotated with 23 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Pkd1l3-005	OTTMUST00000151109.1	6606	2201aa	OTTMUSP00000078364	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40472	Q2EG98
Pkd1l3-002	OTTMUST00000151107.1	6456	2151aa	OTTMUSP00000078362	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22654	A2A258
Pkd1l3-001	OTTMUST00000151108.1	6576	2191aa	OTTMUSP00000078363	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Pkd1l3-003	OTTMUST00000151112.1	2450	816aa	OTTMUSP00000078365	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Pkd1l3-004	OTTMUST00000151111.1	1713	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Pkd1l3-006	OTTMUST00000151110.1	701	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 2,450 bps Translation length: 816 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 29/02/2016 (Created on 29/02/2016)

Alternative symbols

RP24-421D9.4-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 109,647,485-109,674,386 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000212545

Curation Method

Manual annotation from Havana