Description
cleavage and polyadenylation specific factor 3-like
Synonyms
INTS11, CPSF73L, FLJ20542, INT11, RC-68
Location
Chromosome 1: 1,311,585-1,324,691 reverse strand.
VEGA68:CM000663.2
About this gene
This gene has 48 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
CPSF3L-001 | OTTHUMT00000009360.2 | 2148 | 600aa | OTTHUMP00000003390 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS21 | Q5TA45 | |
CPSF3L-009 | OTTHUMT00000009368.2 | 1798 | 499aa | OTTHUMP00000003391 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS57961 | - | |
CPSF3L-007 | OTTHUMT00000009366.2 | 1868 | 342aa | OTTHUMP00000262426 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
CPSF3L-023 | OTTHUMT00000009382.3 | 1839 | 578aa | OTTHUMP00000003397 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
CPSF3L-011 | OTTHUMT00000009370.2 | 1832 | 502aa | OTTHUMP00000003393 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
CPSF3L-016 | OTTHUMT00000009375.5 | 1104 | 289aa | OTTHUMP00000275253 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
CPSF3L-017 | OTTHUMT00000009376.4 | 1056 | 344aa | OTTHUMP00000003396 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CPSF3L-034 | OTTHUMT00000383041.2 | 800 | 249aa | OTTHUMP00000229128 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CPSF3L-030 | OTTHUMT00000383040.2 | 750 | 209aa | OTTHUMP00000229127 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CPSF3L-038 | OTTHUMT00000383039.2 | 579 | 109aa | OTTHUMP00000229126 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CPSF3L-031 | OTTHUMT00000383046.2 | 554 | 167aa | OTTHUMP00000229131 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CPSF3L-032 | OTTHUMT00000383044.2 | 485 | 140aa | OTTHUMP00000229129 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CPSF3L-028 | OTTHUMT00000382824.1 | 1983 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
CPSF3L-010 | OTTHUMT00000009369.2 | 1463 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
CPSF3L-012 | OTTHUMT00000009371.2 | 2571 | 62aa | OTTHUMP00000229000 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CPSF3L-024 | OTTHUMT00000099681.3 | 2004 | 92aa | OTTHUMP00000229021 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CPSF3L-029 | OTTHUMT00000382934.1 | 1618 | 46aa | OTTHUMP00000229058 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CPSF3L-046 | OTTHUMT00000383031.1 | 1524 | 278aa | OTTHUMP00000229122 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CPSF3L-013 | OTTHUMT00000009372.2 | 849 | 101aa | OTTHUMP00000003394 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CPSF3L-042 | OTTHUMT00000383033.1 | 816 | 54aa | OTTHUMP00000229123 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
CPSF3L-043 | OTTHUMT00000383034.1 | 668 | 34aa | OTTHUMP00000229124 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
CPSF3L-037 | OTTHUMT00000383038.1 | 659 | 81aa | OTTHUMP00000229125 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CPSF3L-025 | OTTHUMT00000099682.3 | 584 | 55aa | OTTHUMP00000229022 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
CPSF3L-036 | OTTHUMT00000383047.1 | 579 | 64aa | OTTHUMP00000229132 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
CPSF3L-033 | OTTHUMT00000383045.1 | 549 | 56aa | OTTHUMP00000229130 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CPSF3L-005 | OTTHUMT00000009364.1 | 2863 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CPSF3L-015 | OTTHUMT00000009374.2 | 896 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CPSF3L-027 | OTTHUMT00000382825.1 | 773 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CPSF3L-014 | OTTHUMT00000009373.2 | 704 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CPSF3L-006 | OTTHUMT00000009365.1 | 3079 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-004 | OTTHUMT00000009363.1 | 2450 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-003 | OTTHUMT00000009362.1 | 2428 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-008 | OTTHUMT00000009367.2 | 2369 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-002 | OTTHUMT00000009361.2 | 1589 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-018 | OTTHUMT00000009377.2 | 1134 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-021 | OTTHUMT00000009380.2 | 932 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-020 | OTTHUMT00000009379.2 | 913 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-022 | OTTHUMT00000009381.1 | 883 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-048 | OTTHUMT00000383030.1 | 816 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-026 | OTTHUMT00000382779.1 | 738 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-044 | OTTHUMT00000383035.1 | 704 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-047 | OTTHUMT00000383032.1 | 695 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-019 | OTTHUMT00000009378.2 | 639 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-035 | OTTHUMT00000383048.1 | 595 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-040 | OTTHUMT00000383042.1 | 591 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-039 | OTTHUMT00000383043.1 | 551 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-045 | OTTHUMT00000383036.1 | 548 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CPSF3L-041 | OTTHUMT00000383037.1 | 405 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |