Description
histone deacetylase 7
Synonyms
DKFZP586J0917
Location
Chromosome 12: 47,782,722-47,833,132 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 32 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
HDAC7-001 | OTTHUMT00000328792.1 | 4095 | 991aa | OTTHUMP00000202813 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8756 | - | |
HDAC7-002 | OTTHUMT00000328793.1 | 4065 | 954aa | OTTHUMP00000202814 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41776 | - | |
HDAC7-028 | OTTHUMT00000405589.1 | 3216 | 974aa | OTTHUMP00000241948 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81685 | - | |
HDAC7-029 | OTTHUMT00000405590.1 | 3261 | 1014aa | OTTHUMP00000241949 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KPH8 | |
HDAC7-013 | OTTHUMT00000328804.3 | 3016 | 952aa | OTTHUMP00000202819 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q8WUI4 | |
HDAC7-031 | OTTHUMT00000405673.1 | 1479 | 384aa | OTTHUMP00000241967 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
HDAC7-019 | OTTHUMT00000328810.2 | 914 | 274aa | OTTHUMP00000202825 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JEB6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-014 | OTTHUMT00000328805.2 | 645 | 153aa | OTTHUMP00000202820 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-021 | OTTHUMT00000328812.2 | 593 | 141aa | OTTHUMP00000202827 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-016 | OTTHUMT00000328807.2 | 583 | 138aa | OTTHUMP00000202822 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-020 | OTTHUMT00000328811.2 | 580 | 159aa | OTTHUMP00000202826 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-010 | OTTHUMT00000328801.2 | 579 | 112aa | OTTHUMP00000202816 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-018 | OTTHUMT00000328809.2 | 576 | 133aa | OTTHUMP00000202824 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-009 | OTTHUMT00000328800.2 | 569 | 78aa | OTTHUMP00000202815 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-012 | OTTHUMT00000328803.2 | 555 | 153aa | OTTHUMP00000202818 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-011 | OTTHUMT00000328802.2 | 402 | 88aa | OTTHUMP00000202817 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-015 | OTTHUMT00000328806.3 | 364 | 51aa | OTTHUMP00000202821 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HDAC7-006 | OTTHUMT00000328797.1 | 3129 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HDAC7-032 | OTTHUMT00000405672.1 | 1578 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HDAC7-030 | OTTHUMT00000405675.1 | 3122 | 224aa | OTTHUMP00000241969 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
HDAC7-003 | OTTHUMT00000328794.2 | 2719 | 61aa | OTTHUMP00000241966 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
HDAC7-027 | OTTHUMT00000328818.2 | 739 | 205aa | OTTHUMP00000275143 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
HDAC7-022 | OTTHUMT00000328813.2 | 724 | 152aa | OTTHUMP00000241971 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
HDAC7-017 | OTTHUMT00000328808.2 | 621 | 101aa | OTTHUMP00000202823 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
HDAC7-004 | OTTHUMT00000328795.2 | 569 | 110aa | OTTHUMP00000241970 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
HDAC7-033 | OTTHUMT00000405674.1 | 537 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
HDAC7-026 | OTTHUMT00000328817.2 | 410 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
HDAC7-007 | OTTHUMT00000328798.1 | 6414 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC7-005 | OTTHUMT00000328796.2 | 4266 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC7-008 | OTTHUMT00000328799.1 | 1012 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC7-023 | OTTHUMT00000328814.1 | 559 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HDAC7-024 | OTTHUMT00000328815.1 | 548 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |