Description
caldesmon 1
Synonyms
L-CAD, CDM, H-CAD
Location
Chromosome 7: 134,744,252-134,970,641 forward strand.
VEGA68:CM000669.2
About this gene
This gene has 23 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
CALD1-001 | OTTHUMT00000339935.1 | 4114 | 538aa | OTTHUMP00000207948 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5834 | A0A140VKA0 | |
CALD1-005 | OTTHUMT00000339939.1 | 3612 | 793aa | OTTHUMP00000207952 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5835 | Q05682 | |
CALD1-003 | OTTHUMT00000339937.1 | 2665 | 563aa | OTTHUMP00000207950 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5836 | - | |
CALD1-010 | OTTHUMT00000339942.1 | 2124 | 532aa | OTTHUMP00000207954 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47717 | - | |
CALD1-002 | OTTHUMT00000339936.1 | 1915 | 538aa | OTTHUMP00000207949 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5834 | A0A140VKA0 | |
CALD1-029 | OTTHUMT00000354030.1 | 2199 | 557aa | OTTHUMP00000214473 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EX44 | |
CALD1-012 | OTTHUMT00000339944.2 | 1614 | 459aa | OTTHUMP00000207955 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9J813 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CALD1-017 | OTTHUMT00000339947.7 | 558 | 72aa | OTTHUMP00000208514 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JE79 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CALD1-027 | OTTHUMT00000340809.3 | 525 | 132aa | OTTHUMP00000208516 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JEK3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CALD1-020 | OTTHUMT00000339950.2 | 458 | 72aa | OTTHUMP00000208515 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JE79 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CALD1-009 | OTTHUMT00000339941.1 | 4173 | 536aa | OTTHUMP00000207953 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PGZ1 | |
CALD1-004 | OTTHUMT00000339938.1 | 1938 | 85aa | OTTHUMP00000207951 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WE61 | |
CALD1-015 | OTTHUMT00000339945.1 | 903 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CALD1-021 | OTTHUMT00000339951.1 | 557 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CALD1-026 | OTTHUMT00000340808.1 | 422 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CALD1-023 | OTTHUMT00000339952.1 | 193 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CALD1-016 | OTTHUMT00000339946.1 | 188 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CALD1-008 | OTTHUMT00000339940.1 | 3941 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CALD1-019 | OTTHUMT00000339949.1 | 753 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CALD1-024 | OTTHUMT00000339953.1 | 651 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CALD1-028 | OTTHUMT00000341322.1 | 560 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CALD1-018 | OTTHUMT00000339948.1 | 443 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CALD1-025 | OTTHUMT00000339954.1 | 230 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |