Description
palmitoyl-protein thioesterase 1
Synonyms
INCL, CLN1
Location
Chromosome 1: 40,072,705-40,097,703 reverse strand.
VEGA68:CM000663.2
About this gene
This gene has 13 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
PPT1-001 | OTTHUMT00000013126.3 | 2742 | 306aa | OTTHUMP00000004836 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS447 | P50897 | |
PPT1-006 | OTTHUMT00000385797.1 | 849 | 203aa | OTTHUMP00000230752 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44119 | - | |
PPT1-002 | OTTHUMT00000013127.2 | 827 | 271aa | OTTHUMP00000004837 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PMG2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
PPT1-003 | OTTHUMT00000013128.1 | 659 | 177aa | OTTHUMP00000004838 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5T0S4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
PPT1-011 | OTTHUMT00000386258.3 | 623 | 204aa | OTTHUMP00000231002 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PIA8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
PPT1-012 | OTTHUMT00000386260.2 | 565 | 98aa | OTTHUMP00000231004 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PP28 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
PPT1-013 | OTTHUMT00000386257.1 | 550 | 87aa | OTTHUMP00000231001 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PSE5 | |
PPT1-005 | OTTHUMT00000385795.1 | 1516 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
PPT1-008 | OTTHUMT00000385798.1 | 858 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
PPT1-010 | OTTHUMT00000386259.2 | 562 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
PPT1-009 | OTTHUMT00000386256.1 | 1836 | 306aa | OTTHUMP00000231000 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS447 | P50897 | |
PPT1-007 | OTTHUMT00000385796.1 | 1314 | 148aa | OTTHUMP00000230751 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PK48 | |
PPT1-004 | OTTHUMT00000013129.1 | 563 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |