Description
RAE1 RNA export 1 homolog (S. pombe)
Synonyms
Mnrp41
Location
Chromosome 20: 57,351,010-57,379,211 forward strand.
VEGA68:CM000682.2
About this gene
This gene has 10 transcripts (splice variants), 3 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RAE1-001 | OTTHUMT00000079842.2 | 2639 | 368aa | OTTHUMP00000031366 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13458 | P78406 | |
| RAE1-003 | OTTHUMT00000259500.1 | 2602 | 368aa | OTTHUMP00000166111 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13458 | P78406 | |
| RAE1-002 | OTTHUMT00000259499.1 | 2362 | 368aa | OTTHUMP00000166110 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13458 | P78406 | |
| RAE1-010 | OTTHUMT00000390993.1 | 1503 | 437aa | OTTHUMP00000233932 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| RAE1-005 | OTTHUMT00000259502.2 | 691 | 87aa | OTTHUMP00000166112 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RAE1-006 | OTTHUMT00000259503.2 | 588 | 137aa | OTTHUMP00000166113 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RAE1-007 | OTTHUMT00000259504.1 | 480 | 137aa | OTTHUMP00000166114 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RAE1-009 | OTTHUMT00000390994.1 | 1721 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RAE1-008 | OTTHUMT00000259505.2 | 1156 | 217aa | OTTHUMP00000233933 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| RAE1-004 | OTTHUMT00000259501.1 | 3251 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
