Description
Lck interacting transmembrane adaptor 1
Synonyms
FLJ20406, LIME, dJ583P15.4
Location
Chromosome 20: 63,736,283-63,739,103 forward strand.
VEGA68:CM000682.2
About this gene
This gene has 10 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LIME1-006 | OTTHUMT00000080225.1 | 1178 | 295aa | OTTHUMP00000031598 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13536 | Q9H400 | |
| LIME1-001 | OTTHUMT00000080220.2 | 819 | 176aa | OTTHUMP00000276130 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82638 | A0A087WT39 | |
| LIME1-004 | OTTHUMT00000080223.3 | 809 | 252aa | OTTHUMP00000276131 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WUJ1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LIME1-011 | OTTHUMT00000080230.2 | 805 | 211aa | OTTHUMP00000276129 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WZP9 | |
| LIME1-002 | OTTHUMT00000080221.3 | 661 | 131aa | OTTHUMP00000274452 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | V9GYI1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LIME1-008 | OTTHUMT00000080227.2 | 451 | 106aa | OTTHUMP00000031599 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | X6RKG5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LIME1-003 | OTTHUMT00000080222.1 | 391 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LIME1-007 | OTTHUMT00000080226.2 | 2410 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LIME1-010 | OTTHUMT00000080229.1 | 680 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LIME1-005 | OTTHUMT00000080224.1 | 559 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
