Description
cathepsin A
Location
Chromosome 20: 45,890,144-45,898,820 forward strand.
VEGA68:CM000682.2
About this gene
This gene has 21 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CTSA-001 | OTTHUMT00000080497.1 | 2149 | 498aa | OTTHUMP00000031778 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13385 | X6R8A1 | |
| CTSA-012 | OTTHUMT00000471297.2 | 1972 | 480aa | OTTHUMP00000273687 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46609 | P10619 | |
| CTSA-004 | OTTHUMT00000080500.1 | 1898 | 480aa | OTTHUMP00000031780 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46609 | P10619 | |
| CTSA-006 | OTTHUMT00000080502.9 | 1820 | 481aa | OTTHUMP00000031782 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54467 | X6R5C5 | |
| CTSA-020 | OTTHUMT00000471358.2 | 606 | 202aa | OTTHUMP00000273759 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5JZH0 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| CTSA-016 | OTTHUMT00000471350.2 | 403 | 109aa | OTTHUMP00000273750 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | U3KQ41 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSA-003 | OTTHUMT00000080499.1 | 1765 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CTSA-011 | OTTHUMT00000471296.1 | 1558 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CTSA-023 | OTTHUMT00000471363.1 | 3056 | 231aa | OTTHUMP00000273761 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | U3KQU6 | |
| CTSA-018 | OTTHUMT00000471356.1 | 584 | 82aa | OTTHUMP00000273758 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | U3KQF1 | |
| CTSA-010 | OTTHUMT00000080506.2 | 2183 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-008 | OTTHUMT00000080504.2 | 901 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-007 | OTTHUMT00000080503.1 | 695 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-022 | OTTHUMT00000471360.1 | 644 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-014 | OTTHUMT00000471307.2 | 603 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-017 | OTTHUMT00000471349.1 | 590 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-015 | OTTHUMT00000471308.1 | 584 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-019 | OTTHUMT00000471357.1 | 582 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-013 | OTTHUMT00000471306.1 | 571 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-009 | OTTHUMT00000080505.1 | 513 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSA-021 | OTTHUMT00000471359.1 | 509 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
