Description
peroxidasin homolog (Drosophila)
Synonyms
D2S448E, D2S448, MG50, KIAA0230, PXN, PRG2
Location
Chromosome 2: 1,631,887-1,744,852 reverse strand.
VEGA68:CM000664.2
About this gene
This gene has 15 transcripts (splice variants), 45 orthologues and 44 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PXDN-001 | OTTHUMT00000322505.1 | 6808 | 1479aa | OTTHUMP00000199942 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46221 | Q92626 | |
| PXDN-002 | OTTHUMT00000322506.1 | 2643 | 723aa | OTTHUMP00000199943 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PXDN-006 | OTTHUMT00000322510.2 | 720 | 224aa | OTTHUMP00000199944 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PXDN-007 | OTTHUMT00000322511.2 | 588 | 196aa | OTTHUMP00000199945 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PXDN-005 | OTTHUMT00000322509.1 | 2222 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PXDN-009 | OTTHUMT00000322513.1 | 740 | 76aa | OTTHUMP00000199946 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PXDN-015 | OTTHUMT00000322519.1 | 593 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PXDN-010 | OTTHUMT00000322514.1 | 570 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PXDN-014 | OTTHUMT00000322518.1 | 567 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PXDN-012 | OTTHUMT00000322516.1 | 543 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PXDN-011 | OTTHUMT00000322515.1 | 534 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PXDN-008 | OTTHUMT00000322512.1 | 519 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PXDN-003 | OTTHUMT00000322507.1 | 3840 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PXDN-004 | OTTHUMT00000322508.1 | 2796 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PXDN-013 | OTTHUMT00000322517.1 | 772 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
