Description
U2 small nuclear RNA auxiliary factor 1
Synonyms
RN, U2AF35, RNU2AF1
Location
Chromosome 21: 43,092,956-43,107,587 reverse strand.
VEGA68:CM000683.2
About this gene
This gene has 12 transcripts (splice variants), 9 orthologues and 5 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| U2AF1-004 | OTTHUMT00000195544.2 | 1675 | 167aa | OTTHUMP00000214620 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42948 | - | |
| U2AF1-001 | OTTHUMT00000195541.1 | 962 | 240aa | OTTHUMP00000109423 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13694 | P0DN76 | |
| U2AF1-002 | OTTHUMT00000195542.1 | 940 | 240aa | OTTHUMP00000109424 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS33574 | - | |
| U2AF1-012 | OTTHUMT00000489728.1 | 3545 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| U2AF1-003 | OTTHUMT00000195543.2 | 966 | 75aa | OTTHUMP00000214619 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| U2AF1-010 | OTTHUMT00000195550.2 | 682 | 45aa | OTTHUMP00000282242 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A1B0GW87 | |
| U2AF1-005 | OTTHUMT00000195545.1 | 4694 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2AF1-006 | OTTHUMT00000195546.1 | 3973 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2AF1-007 | OTTHUMT00000195547.1 | 3344 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2AF1-008 | OTTHUMT00000195548.1 | 1676 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2AF1-011 | OTTHUMT00000195551.1 | 609 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| U2AF1-009 | OTTHUMT00000195549.1 | 338 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
