Description
solute carrier family 5 (sodium-dependent vitamin transporter), member 6
Synonyms
SMVT
Location
Chromosome 2: 27,199,587-27,212,958 reverse strand.
VEGA68:CM000664.2
About this gene
This gene has 18 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SLC5A6-001 | OTTHUMT00000214194.1 | 3231 | 635aa | OTTHUMP00000122593 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1740 | Q9Y289 | |
| SLC5A6-003 | OTTHUMT00000324954.2 | 2230 | 635aa | OTTHUMP00000201025 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1740 | Q9Y289 | |
| SLC5A6-004 | OTTHUMT00000324955.5 | 917 | 193aa | OTTHUMP00000201026 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EMX0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC5A6-005 | OTTHUMT00000324956.3 | 741 | 78aa | OTTHUMP00000201027 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EW41 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC5A6-006 | OTTHUMT00000324957.2 | 732 | 147aa | OTTHUMP00000201028 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EW78 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC5A6-009 | OTTHUMT00000324960.2 | 725 | 133aa | OTTHUMP00000201031 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ENG0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC5A6-007 | OTTHUMT00000324958.3 | 676 | 115aa | OTTHUMP00000201029 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ERE1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC5A6-011 | OTTHUMT00000324962.3 | 599 | 38aa | OTTHUMP00000201033 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EXC0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC5A6-012 | OTTHUMT00000324963.3 | 570 | 58aa | OTTHUMP00000201034 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EP02 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC5A6-010 | OTTHUMT00000324961.3 | 542 | 27aa | OTTHUMP00000201032 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC5A6-008 | OTTHUMT00000324959.1 | 871 | 153aa | OTTHUMP00000201030 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E7ENN0 | |
| SLC5A6-017 | OTTHUMT00000324968.1 | 598 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SLC5A6-002 | OTTHUMT00000324953.2 | 3174 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC5A6-018 | OTTHUMT00000324969.1 | 2307 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC5A6-014 | OTTHUMT00000324965.1 | 842 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC5A6-015 | OTTHUMT00000324966.1 | 705 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC5A6-013 | OTTHUMT00000324964.1 | 664 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC5A6-016 | OTTHUMT00000324967.1 | 615 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
