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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: OTX1 OTTHUMG00000129454

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Description

orthodenticle homeobox 1

Location

Chromosome 2: 63,050,057-63,057,836 forward strand.

VEGA68:CM000664.2

About this gene

This gene has 6 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
OTX1-001	OTTHUMT00000251617.1	2861	354aa	OTTHUMP00000159827	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1873	P32242
OTX1-002	OTTHUMT00000326731.1	2861	354aa	OTTHUMP00000201938	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1873	P32242
OTX1-005	OTTHUMT00000411625.1	1694	101aa	OTTHUMP00000245069	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
OTX1-003	OTTHUMT00000326732.2	1244	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
OTX1-004	OTTHUMT00000326733.1	624	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
OTX1-006	OTTHUMT00000326735.1	564	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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