Description
ring finger protein 40
Synonyms
RBP95, KIAA0661, STARING, BRE1B
Location
Chromosome 16: 30,761,745-30,776,307 forward strand.
VEGA68:CM000678.2
About this gene
This gene has 18 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RNF40-001 | OTTHUMT00000255524.3 | 5634 | 1001aa | OTTHUMP00000163227 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10691 | A0A024QZG0 | |
| RNF40-009 | OTTHUMT00000434280.2 | 3917 | 901aa | OTTHUMP00000255375 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55994 | - | |
| RNF40-011 | OTTHUMT00000434279.2 | 4063 | 961aa | OTTHUMP00000255374 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BP71 | |
| RNF40-012 | OTTHUMT00000434272.2 | 711 | 111aa | OTTHUMP00000255371 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RNF40-019 | OTTHUMT00000434288.2 | 597 | 177aa | OTTHUMP00000276069 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RNF40-010 | OTTHUMT00000434277.4 | 586 | 174aa | OTTHUMP00000258830 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RNF40-013 | OTTHUMT00000434273.2 | 569 | 129aa | OTTHUMP00000255372 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RNF40-015 | OTTHUMT00000434281.3 | 481 | 144aa | OTTHUMP00000257494 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RNF40-003 | OTTHUMT00000434275.2 | 2637 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RNF40-007 | OTTHUMT00000434283.1 | 2253 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RNF40-004 | OTTHUMT00000434278.2 | 1745 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RNF40-006 | OTTHUMT00000434282.1 | 1553 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RNF40-008 | OTTHUMT00000434285.2 | 1481 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RNF40-005 | OTTHUMT00000434276.1 | 932 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RNF40-020 | OTTHUMT00000467934.1 | 991 | 14aa | OTTHUMP00000272383 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RNF40-002 | OTTHUMT00000255525.1 | 5371 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RNF40-017 | OTTHUMT00000434286.1 | 808 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RNF40-018 | OTTHUMT00000434287.2 | 768 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
