Description
NLR family, pyrin domain containing 1
Synonyms
NAC, KIAA0926, DKFZp586O1822, VAMAS1, DEFCAP, CLR17.1, CARD7
Location
Chromosome 17: 5,499,425-5,619,424 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 14 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| NLRP1-008 | OTTHUMT00000439515.3 | 5444 | 1429aa | OTTHUMP00000257941 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42245 | I3L2G5 | |
| NLRP1-001 | OTTHUMT00000439513.1 | 5131 | 1375aa | OTTHUMP00000257940 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32537 | - | |
| NLRP1-010 | OTTHUMT00000439516.1 | 5075 | 1429aa | OTTHUMP00000257942 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42245 | - | |
| NLRP1-011 | OTTHUMT00000439517.2 | 4422 | 1473aa | OTTHUMP00000257943 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42246 | Q9C000 | |
| NLRP1-012 | OTTHUMT00000439518.1 | 4332 | 1443aa | OTTHUMP00000257944 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42244 | - | |
| NLRP1-009 | OTTHUMT00000439519.1 | 4200 | 1399aa | OTTHUMP00000257945 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58508 | - | |
| NLRP1-014 | OTTHUMT00000439521.3 | 555 | 35aa | OTTHUMP00000257946 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NLRP1-006 | OTTHUMT00000439510.1 | 2123 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| NLRP1-002 | OTTHUMT00000439511.1 | 5281 | 1375aa | OTTHUMP00000257939 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | CCDS32537 | - | |
| NLRP1-007 | OTTHUMT00000439520.1 | 4050 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NLRP1-003 | OTTHUMT00000439512.1 | 1750 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NLRP1-004 | OTTHUMT00000255557.2 | 1627 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NLRP1-013 | OTTHUMT00000439522.1 | 578 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| NLRP1-005 | OTTHUMT00000439514.1 | 4506 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
