Description
proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
Synonyms
S1, Rpn2, P112
Location
Chromosome 2: 231,056,864-231,172,827 forward strand.
VEGA68:CM000664.2
About this gene
This gene has 12 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PSMD1-001 | OTTHUMT00000256958.2 | 3326 | 953aa | OTTHUMP00000164295 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2482 | Q99460 | |
| PSMD1-003 | OTTHUMT00000333232.2 | 2901 | 922aa | OTTHUMP00000204737 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54436 | - | |
| PSMD1-005 | OTTHUMT00000333234.2 | 761 | 203aa | OTTHUMP00000204738 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PSMD1-009 | OTTHUMT00000333238.1 | 696 | 192aa | OTTHUMP00000204740 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PSMD1-006 | OTTHUMT00000333235.2 | 491 | 164aa | OTTHUMP00000204739 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| PSMD1-004 | OTTHUMT00000333233.1 | 2433 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PSMD1-002 | OTTHUMT00000333231.1 | 2506 | 48aa | OTTHUMP00000204736 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| PSMD1-007 | OTTHUMT00000333236.1 | 659 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PSMD1-011 | OTTHUMT00000333240.1 | 723 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PSMD1-008 | OTTHUMT00000333237.1 | 546 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PSMD1-010 | OTTHUMT00000333239.1 | 444 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PSMD1-012 | OTTHUMT00000333241.1 | 352 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
