Description
heat shock 60kDa protein 1 (chaperonin)
Synonyms
GroEL, HSP60
Location
Chromosome 2: 197,486,581-197,516,737 reverse strand.
VEGA68:CM000664.2
About this gene
This gene has 14 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HSPD1-001 | OTTHUMT00000335324.2 | 2455 | 573aa | OTTHUMP00000205744 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS33357 | A0A024R3X4 | |
| HSPD1-006 | OTTHUMT00000335329.2 | 888 | 221aa | OTTHUMP00000205745 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EXB4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HSPD1-013 | OTTHUMT00000336365.2 | 754 | 234aa | OTTHUMP00000206303 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7ESH4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HSPD1-011 | OTTHUMT00000335334.2 | 578 | 83aa | OTTHUMP00000205749 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JL19 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HSPD1-010 | OTTHUMT00000335333.2 | 549 | 94aa | OTTHUMP00000205748 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JCQ4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HSPD1-012 | OTTHUMT00000335335.3 | 533 | 58aa | OTTHUMP00000205750 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HSPD1-009 | OTTHUMT00000335332.2 | 529 | 175aa | OTTHUMP00000205747 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JL25 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HSPD1-002 | OTTHUMT00000335325.1 | 2989 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HSPD1-007 | OTTHUMT00000335330.1 | 619 | 48aa | OTTHUMP00000205746 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| HSPD1-003 | OTTHUMT00000335326.1 | 860 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HSPD1-008 | OTTHUMT00000335331.1 | 853 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HSPD1-014 | OTTHUMT00000336366.1 | 714 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HSPD1-005 | OTTHUMT00000335328.1 | 648 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HSPD1-004 | OTTHUMT00000335327.1 | 491 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
