Description
amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8
Synonyms
CaRF, NYD-SP24, FLJ21579
Location
Chromosome 2: 202,912,214-202,987,063 forward strand.
VEGA68:CM000664.2
About this gene
This gene has 19 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CARF-001 | OTTHUMT00000335768.5 | 5938 | 725aa | OTTHUMP00000205931 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42801 | A0A024R427 | |
| CARF-002 | OTTHUMT00000335854.2 | 3574 | 725aa | OTTHUMP00000205969 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42801 | A0A024R427 | |
| CARF-005 | OTTHUMT00000335857.1 | 2513 | 649aa | OTTHUMP00000205972 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS63091 | - | |
| CARF-008 | OTTHUMT00000335860.1 | 2854 | 309aa | OTTHUMP00000205974 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| CARF-004 | OTTHUMT00000335856.1 | 2099 | 623aa | OTTHUMP00000205971 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| CARF-007 | OTTHUMT00000335859.2 | 1955 | 207aa | OTTHUMP00000208095 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| CARF-010 | OTTHUMT00000335862.2 | 726 | 131aa | OTTHUMP00000205975 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CARF-019 | OTTHUMT00000340341.2 | 597 | 95aa | OTTHUMP00000208094 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CARF-017 | OTTHUMT00000340339.2 | 595 | 73aa | OTTHUMP00000208092 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CARF-009 | OTTHUMT00000335861.4 | 594 | 92aa | OTTHUMP00000206218 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CARF-014 | OTTHUMT00000340336.2 | 575 | 54aa | OTTHUMP00000208089 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CARF-011 | OTTHUMT00000335863.3 | 572 | 80aa | OTTHUMP00000206219 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CARF-018 | OTTHUMT00000340340.2 | 572 | 72aa | OTTHUMP00000208093 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CARF-015 | OTTHUMT00000340337.2 | 537 | 21aa | OTTHUMP00000208090 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CARF-016 | OTTHUMT00000340338.3 | 460 | 38aa | OTTHUMP00000208091 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CARF-003 | OTTHUMT00000335855.1 | 1592 | 419aa | OTTHUMP00000205970 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CARF-006 | OTTHUMT00000335858.1 | 1136 | 189aa | OTTHUMP00000205973 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CARF-012 | OTTHUMT00000335864.3 | 943 | 33aa | OTTHUMP00000206220 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| CARF-013 | OTTHUMT00000340335.1 | 929 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |
