Description
podocalyxin-like
Synonyms
PCLP, PC, Gp200
Location
Chromosome 7: 131,500,262-131,558,217 reverse strand.
VEGA68:CM000669.2
About this gene
This gene has 9 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PODXL-005 | OTTHUMT00000337627.2 | 2105 | 558aa | OTTHUMP00000206940 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34755 | O00592 | |
| PODXL-001 | OTTHUMT00000337626.1 | 2011 | 526aa | OTTHUMP00000206939 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47714 | - | |
| PODXL-011 | OTTHUMT00000338012.1 | 6167 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PODXL-003 | OTTHUMT00000337625.1 | 6170 | 324aa | OTTHUMP00000206938 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V0E6 | |
| PODXL-010 | OTTHUMT00000337632.1 | 530 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PODXL-007 | OTTHUMT00000337629.1 | 809 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PODXL-009 | OTTHUMT00000337631.1 | 797 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PODXL-006 | OTTHUMT00000337628.1 | 588 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PODXL-008 | OTTHUMT00000337630.1 | 571 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
