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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: CLDN1 OTTHUMG00000156214

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Description

claudin 1

Synonyms

SEMP1, ILVASC

Location

Chromosome 3: 190,305,701-190,322,475 reverse strand.

VEGA68:CM000665.2

About this gene

This gene has 4 transcripts (splice variants), 19 orthologues and 18 paralogues.

Transcripts

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Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CLDN1-001	OTTHUMT00000343516.2	3481	211aa	OTTHUMP00000209498	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3295	O95832
CLDN1-002	OTTHUMT00000343517.1	2218	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CLDN1-003	OTTHUMT00000343518.1	1094	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CLDN1-004	OTTHUMT00000343561.1	432	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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