Description
hydroxyprostaglandin dehydrogenase 15-(NAD)
Synonyms
SDR36C1
Location
Chromosome 4: 174,490,177-174,523,154 reverse strand.
VEGA68:CM000666.2
About this gene
This gene has 12 transcripts (splice variants), 13 orthologues and 9 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HPGD-001 | OTTHUMT00000362228.3 | 3027 | 266aa | OTTHUMP00000218960 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3821 | P15428 | |
| HPGD-002 | OTTHUMT00000362232.3 | 1535 | 145aa | OTTHUMP00000218961 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58933 | - | |
| HPGD-013 | OTTHUMT00000362379.1 | 1171 | 178aa | OTTHUMP00000219018 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54821 | - | |
| HPGD-011 | OTTHUMT00000362377.1 | 805 | 198aa | OTTHUMP00000219016 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58934 | - | |
| HPGD-004 | OTTHUMT00000362234.1 | 1910 | 176aa | OTTHUMP00000218963 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HPGD-010 | OTTHUMT00000362376.2 | 827 | 97aa | OTTHUMP00000219015 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RA66 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HPGD-008 | OTTHUMT00000362239.3 | 819 | 99aa | OTTHUMP00000218965 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RA83 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| HPGD-005 | OTTHUMT00000362235.1 | 1553 | 37aa | OTTHUMP00000218964 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| HPGD-003 | OTTHUMT00000362233.1 | 1046 | 87aa | OTTHUMP00000218962 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| HPGD-007 | OTTHUMT00000362237.1 | 786 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HPGD-006 | OTTHUMT00000362236.1 | 666 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HPGD-009 | OTTHUMT00000362375.1 | 536 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
