Description
sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
Synonyms
DMDA2, adhalin, A2, SCARMD1, LGMD2D
Location
Chromosome 17: 50,164,214-50,175,931 forward strand.
VEGA68:CM000679.2
About this gene
This gene has 11 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SGCA-001 | OTTHUMT00000366841.1 | 1432 | 387aa | OTTHUMP00000221051 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32679 | A0A0S2Z4Q1 | |
| SGCA-002 | OTTHUMT00000366842.1 | 1057 | 263aa | OTTHUMP00000221052 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45729 | A0A0S2Z4P8 | |
| SGCA-011 | OTTHUMT00000366851.1 | 696 | 160aa | OTTHUMP00000221061 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y8T1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SGCA-008 | OTTHUMT00000366848.3 | 668 | 196aa | OTTHUMP00000221058 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H7C5V0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SGCA-004 | OTTHUMT00000366844.1 | 1349 | 61aa | OTTHUMP00000221054 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RAA4 | |
| SGCA-003 | OTTHUMT00000366843.1 | 1090 | 298aa | OTTHUMP00000221053 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PCT8 | |
| SGCA-010 | OTTHUMT00000366850.1 | 577 | 58aa | OTTHUMP00000221060 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SGCA-006 | OTTHUMT00000366846.1 | 542 | 65aa | OTTHUMP00000221056 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SGCA-005 | OTTHUMT00000366845.1 | 734 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SGCA-013 | OTTHUMT00000366853.1 | 410 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SGCA-012 | OTTHUMT00000366852.1 | 494 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
