Description
Rap guanine nucleotide exchange factor (GEF) 6
Synonyms
RA-GEF-2, PDZ-GEF2
Location
Chromosome 5: 131,423,921-131,635,236 reverse strand.
VEGA68:CM000667.2
About this gene
This gene has 15 transcripts (splice variants), 11 orthologues and 7 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RAPGEF6-001 | OTTHUMT00000370059.1 | 8357 | 1601aa | OTTHUMP00000222521 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34225 | Q8TEU7 | |
| RAPGEF6-015 | OTTHUMT00000484411.1 | 5742 | 1509aa | OTTHUMP00000279368 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54901 | - | |
| RAPGEF6-006 | OTTHUMT00000370064.1 | 5618 | 1609aa | OTTHUMP00000222526 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54900 | - | |
| RAPGEF6-016 | OTTHUMT00000487772.1 | 4694 | 1504aa | OTTHUMP00000280985 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54899 | - | |
| RAPGEF6-004 | OTTHUMT00000370062.2 | 4176 | 1391aa | OTTHUMP00000222524 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54898 | - | |
| RAPGEF6-008 | OTTHUMT00000370066.1 | 3107 | 827aa | OTTHUMP00000222527 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54897 | - | |
| RAPGEF6-005 | OTTHUMT00000370063.1 | 3535 | 1114aa | OTTHUMP00000222525 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RE77 | |
| RAPGEF6-012 | OTTHUMT00000370070.3 | 560 | 155aa | OTTHUMP00000222528 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RAPGEF6-013 | OTTHUMT00000370071.2 | 552 | 155aa | OTTHUMP00000222529 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RAPGEF6-014 | OTTHUMT00000370072.2 | 542 | 149aa | OTTHUMP00000222530 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RAPGEF6-002 | OTTHUMT00000370060.1 | 4103 | 1204aa | OTTHUMP00000222522 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B7Z7Y1 | |
| RAPGEF6-010 | OTTHUMT00000370068.2 | 149 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RAPGEF6-007 | OTTHUMT00000370065.1 | 3683 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RAPGEF6-009 | OTTHUMT00000370067.1 | 2200 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RAPGEF6-011 | OTTHUMT00000370069.1 | 581 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
