Description
calpain 1, (mu/I) large subunit
Synonyms
CANPL1, muCL, muCANP, CANP
Location
Chromosome 11: 65,180,566-65,212,006 forward strand.
VEGA68:CM000673.2
About this gene
This gene has 30 transcripts (splice variants), 12 orthologues and 8 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CAPN1-004 | OTTHUMT00000385325.1 | 3086 | 714aa | OTTHUMP00000230461 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44644 | P07384 | |
| CAPN1-001 | OTTHUMT00000385306.1 | 3083 | 714aa | OTTHUMP00000230448 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44644 | P07384 | |
| CAPN1-003 | OTTHUMT00000385314.1 | 3007 | 714aa | OTTHUMP00000230454 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44644 | P07384 | |
| CAPN1-002 | OTTHUMT00000385311.1 | 2960 | 714aa | OTTHUMP00000230453 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44644 | P07384 | |
| CAPN1-028 | OTTHUMT00000385310.1 | 2792 | 714aa | OTTHUMP00000230452 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44644 | P07384 | |
| CAPN1-015 | OTTHUMT00000385326.2 | 690 | 191aa | OTTHUMP00000230462 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PL37 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-027 | OTTHUMT00000385305.2 | 593 | 191aa | OTTHUMP00000230447 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PQB3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-009 | OTTHUMT00000385308.2 | 582 | 161aa | OTTHUMP00000230450 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJA6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-010 | OTTHUMT00000385319.2 | 581 | 135aa | OTTHUMP00000230456 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJJ3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-029 | OTTHUMT00000385324.2 | 573 | 148aa | OTTHUMP00000230460 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PLC9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-026 | OTTHUMT00000385304.2 | 571 | 163aa | OTTHUMP00000230446 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PSA6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-011 | OTTHUMT00000385316.2 | 568 | 63aa | OTTHUMP00000230455 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PIA9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-013 | OTTHUMT00000385323.1 | 564 | 152aa | OTTHUMP00000230459 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PMC6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-017 | OTTHUMT00000385309.1 | 550 | 161aa | OTTHUMP00000230451 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJA6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-012 | OTTHUMT00000385322.2 | 496 | 122aa | OTTHUMP00000230458 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PLX0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CAPN1-033 | OTTHUMT00000385320.1 | 2390 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CAPN1-031 | OTTHUMT00000385312.1 | 1092 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CAPN1-021 | OTTHUMT00000385321.1 | 754 | 201aa | OTTHUMP00000230457 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PRM1 | |
| CAPN1-020 | OTTHUMT00000385318.1 | 584 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CAPN1-025 | OTTHUMT00000385330.1 | 572 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CAPN1-019 | OTTHUMT00000385317.1 | 558 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CAPN1-032 | OTTHUMT00000385315.1 | 341 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CAPN1-007 | OTTHUMT00000385332.1 | 2828 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN1-008 | OTTHUMT00000385334.1 | 1415 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN1-006 | OTTHUMT00000385327.1 | 879 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN1-022 | OTTHUMT00000385328.1 | 878 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN1-023 | OTTHUMT00000385331.1 | 643 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN1-024 | OTTHUMT00000385333.1 | 643 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN1-014 | OTTHUMT00000385313.1 | 577 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CAPN1-016 | OTTHUMT00000385329.1 | 348 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
