Description
solute carrier family 43, member 1
Synonyms
PB39, R00504
Location
Chromosome 11: 57,484,534-57,515,786 reverse strand.
VEGA68:CM000673.2
About this gene
This gene has 11 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
SLC43A1-001 | OTTHUMT00000392541.1 | 2598 | 559aa | OTTHUMP00000234819 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7958 | O75387 | |
SLC43A1-002 | OTTHUMT00000392542.1 | 2358 | 559aa | OTTHUMP00000234820 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7958 | O75387 | |
SLC43A1-005 | OTTHUMT00000392545.1 | 999 | 259aa | OTTHUMP00000234823 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJ68 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SLC43A1-003 | OTTHUMT00000392547.1 | 690 | 110aa | OTTHUMP00000234825 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJT8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SLC43A1-010 | OTTHUMT00000392591.2 | 556 | 186aa | OTTHUMP00000234848 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YEH0 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
SLC43A1-006 | OTTHUMT00000392543.1 | 885 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SLC43A1-011 | OTTHUMT00000392594.1 | 953 | 58aa | OTTHUMP00000234849 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PRF0 | |
SLC43A1-007 | OTTHUMT00000392544.1 | 788 | 171aa | OTTHUMP00000234822 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PR87 | |
SLC43A1-004 | OTTHUMT00000392546.1 | 580 | 58aa | OTTHUMP00000234824 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PRF0 | |
SLC43A1-008 | OTTHUMT00000392593.1 | 774 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SLC43A1-009 | OTTHUMT00000392592.1 | 821 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |