Description
lactate dehydrogenase A
Location
Chromosome 11: 18,394,388-18,408,425 forward strand.
VEGA68:CM000673.2
About this gene
This gene has 24 transcripts (splice variants), 5 orthologues and 4 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LDHA-001 | OTTHUMT00000258172.2 | 2416 | 332aa | OTTHUMP00000165205 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7839 | P00338 | |
| LDHA-005 | OTTHUMT00000258176.2 | 1922 | 332aa | OTTHUMP00000236646 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7839 | P00338 | |
| LDHA-003 | OTTHUMT00000258174.2 | 1887 | 241aa | OTTHUMP00000165207 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53611 | - | |
| LDHA-002 | OTTHUMT00000258173.1 | 1766 | 274aa | OTTHUMP00000165206 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS53610 | - | |
| LDHA-010 | OTTHUMT00000395878.1 | 1310 | 274aa | OTTHUMP00000236636 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44549 | - | |
| LDHA-020 | OTTHUMT00000395886.2 | 1288 | 332aa | OTTHUMP00000236647 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7839 | P00338 | |
| LDHA-009 | OTTHUMT00000258180.3 | 732 | 144aa | OTTHUMP00000236644 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5GYU2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LDHA-004 | OTTHUMT00000258175.3 | 682 | 114aa | OTTHUMP00000236645 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5GXH2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LDHA-013 | OTTHUMT00000395876.2 | 576 | 156aa | OTTHUMP00000236634 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5GXY2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LDHA-014 | OTTHUMT00000395879.2 | 465 | 72aa | OTTHUMP00000236637 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5GZQ4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LDHA-012 | OTTHUMT00000395884.2 | 1314 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| LDHA-011 | OTTHUMT00000395885.1 | 1340 | 45aa | OTTHUMP00000236643 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5GWW2 | |
| LDHA-017 | OTTHUMT00000395887.1 | 664 | 45aa | OTTHUMP00000236648 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5GWW2 | |
| LDHA-019 | OTTHUMT00000395883.1 | 582 | 89aa | OTTHUMP00000236641 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5H5J4 | |
| LDHA-018 | OTTHUMT00000395877.1 | 570 | 42aa | OTTHUMP00000236635 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5H8H6 | |
| LDHA-016 | OTTHUMT00000395880.1 | 556 | 94aa | OTTHUMP00000236638 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5H6W8 | |
| LDHA-015 | OTTHUMT00000395881.1 | 554 | 46aa | OTTHUMP00000236639 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5GXU1 | |
| LDHA-021 | OTTHUMT00000395882.1 | 516 | 45aa | OTTHUMP00000236640 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F5GXC7 | |
| LDHA-023 | OTTHUMT00000395889.1 | 2169 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LDHA-022 | OTTHUMT00000395888.1 | 1511 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LDHA-024 | OTTHUMT00000395890.1 | 1345 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LDHA-007 | OTTHUMT00000258178.2 | 1154 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LDHA-008 | OTTHUMT00000258179.1 | 680 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LDHA-006 | OTTHUMT00000258177.2 | 656 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
