Description
lipopolysaccharide-induced TNF factor
Synonyms
PIG7, SIMPLE, TP53I7, FLJ38636
Location
Chromosome 16: 11,547,722-11,636,381 reverse strand.
VEGA68:CM000678.2
About this gene
This gene has 19 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LITAF-001 | OTTHUMT00000436794.3 | 2632 | 161aa | OTTHUMP00000256583 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32386 | Q99732 | |
| LITAF-005 | OTTHUMT00000436819.1 | 2356 | 161aa | OTTHUMP00000256598 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32386 | Q99732 | |
| LITAF-002 | OTTHUMT00000436818.1 | 2292 | 152aa | OTTHUMP00000256597 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45411 | - | |
| LITAF-006 | OTTHUMT00000436820.1 | 1118 | 161aa | OTTHUMP00000256599 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32386 | Q99732 | |
| LITAF-010 | OTTHUMT00000436827.1 | 717 | 161aa | OTTHUMP00000256604 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32386 | Q99732 | |
| LITAF-017 | OTTHUMT00000436826.1 | 603 | 161aa | OTTHUMP00000256603 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32386 | Q99732 | |
| LITAF-016 | OTTHUMT00000436821.1 | 677 | 75aa | OTTHUMP00000256600 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| LITAF-009 | OTTHUMT00000436829.2 | 593 | 137aa | OTTHUMP00000256606 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | I3L1I9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LITAF-013 | OTTHUMT00000436834.3 | 587 | 39aa | OTTHUMP00000256611 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LITAF-012 | OTTHUMT00000436828.2 | 579 | 153aa | OTTHUMP00000256605 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | I3L3U8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LITAF-018 | OTTHUMT00000436835.2 | 556 | 33aa | OTTHUMP00000256612 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LITAF-019 | OTTHUMT00000436833.2 | 554 | 88aa | OTTHUMP00000256610 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LITAF-007 | OTTHUMT00000436830.2 | 553 | 136aa | OTTHUMP00000256607 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | I3L1P1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| LITAF-008 | OTTHUMT00000436831.1 | 548 | 126aa | OTTHUMP00000256608 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | I3L329 | |
| LITAF-011 | OTTHUMT00000436825.1 | 516 | 68aa | OTTHUMP00000256602 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | I3L1H3 | |
| LITAF-004 | OTTHUMT00000436832.1 | 486 | 105aa | OTTHUMP00000256609 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| LITAF-003 | OTTHUMT00000436823.1 | 347 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| LITAF-015 | OTTHUMT00000436824.1 | 773 | 81aa | OTTHUMP00000256601 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| LITAF-014 | OTTHUMT00000436822.2 | 582 | 10aa | OTTHUMP00000258648 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
