Description
scaffold attachment factor B2
Synonyms
KIAA0138
Location
Chromosome 19: 5,586,999-5,624,046 reverse strand.
VEGA68:CM000681.2
About this gene
This gene has 12 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SAFB2-001 | OTTHUMT00000451016.1 | 3371 | 953aa | OTTHUMP00000264128 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32879 | Q14151 | |
| SAFB2-004 | OTTHUMT00000451025.3 | 564 | 124aa | OTTHUMP00000264131 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ERX3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SAFB2-012 | OTTHUMT00000452518.1 | 844 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SAFB2-002 | OTTHUMT00000451024.1 | 1298 | 115aa | OTTHUMP00000264130 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SAFB2-005 | OTTHUMT00000451020.1 | 836 | 87aa | OTTHUMP00000264129 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SAFB2-006 | OTTHUMT00000451023.1 | 722 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SAFB2-010 | OTTHUMT00000451017.1 | 583 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SAFB2-008 | OTTHUMT00000451018.1 | 506 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SAFB2-003 | OTTHUMT00000451021.1 | 2260 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SAFB2-009 | OTTHUMT00000451019.1 | 633 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SAFB2-007 | OTTHUMT00000451022.1 | 551 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SAFB2-011 | OTTHUMT00000451977.1 | 443 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
