Description
ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b
Synonyms
VMA16, HATPL
Location
Chromosome 1: 43,974,487-43,978,295 forward strand.
VEGA68:CM000663.2
About this gene
This gene has 14 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ATP6V0B-012 | OTTHUMT00000386639.1 | 1685 | 261aa | OTTHUMP00000231252 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS72772 | E9PNL3 | |
| ATP6V0B-001 | OTTHUMT00000022854.2 | 1298 | 205aa | OTTHUMP00000010012 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS505 | Q99437 | |
| ATP6V0B-004 | OTTHUMT00000022857.2 | 944 | 158aa | OTTHUMP00000231253 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41315 | - | |
| ATP6V0B-011 | OTTHUMT00000022864.2 | 825 | 158aa | OTTHUMP00000231257 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41315 | - | |
| ATP6V0B-006 | OTTHUMT00000022859.2 | 865 | 252aa | OTTHUMP00000231254 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PNU0 | |
| ATP6V0B-013 | OTTHUMT00000386638.2 | 411 | 86aa | OTTHUMP00000231251 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PMR1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ATP6V0B-005 | OTTHUMT00000022858.1 | 483 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ATP6V0B-009 | OTTHUMT00000022862.2 | 530 | 46aa | OTTHUMP00000231255 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PKB6 | |
| ATP6V0B-007 | OTTHUMT00000022860.2 | 419 | 88aa | OTTHUMP00000231256 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ATP6V0B-008 | OTTHUMT00000022861.1 | 536 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ATP6V0B-003 | OTTHUMT00000022856.1 | 2432 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATP6V0B-002 | OTTHUMT00000022855.1 | 1664 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATP6V0B-010 | OTTHUMT00000022863.1 | 962 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ATP6V0B-014 | OTTHUMT00000386640.1 | 577 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
