Description
farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)
Location
Chromosome 1: 155,308,755-155,320,665 forward strand.
VEGA68:CM000663.2
About this gene
This gene has 20 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| FDPS-001 | OTTHUMT00000039053.1 | 1478 | 419aa | OTTHUMP00000015807 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1110 | P14324 | |
| FDPS-002 | OTTHUMT00000039054.1 | 1431 | 419aa | OTTHUMP00000015808 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1110 | P14324 | |
| FDPS-021 | OTTHUMT00000476538.2 | 1256 | 353aa | OTTHUMP00000275718 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44241 | P14324 | |
| FDPS-019 | OTTHUMT00000476540.1 | 1198 | 353aa | OTTHUMP00000275724 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44241 | P14324 | |
| FDPS-020 | OTTHUMT00000476539.1 | 1178 | 353aa | OTTHUMP00000275721 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44241 | P14324 | |
| FDPS-004 | OTTHUMT00000039056.3 | 912 | 274aa | OTTHUMP00000275722 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WVN4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| FDPS-007 | OTTHUMT00000039059.3 | 677 | 174aa | OTTHUMP00000275723 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087X1D8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| FDPS-010 | OTTHUMT00000039062.2 | 713 | 80aa | OTTHUMP00000275720 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| FDPS-003 | OTTHUMT00000039055.1 | 938 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| FDPS-008 | OTTHUMT00000039060.1 | 746 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| FDPS-009 | OTTHUMT00000039061.1 | 741 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| FDPS-015 | OTTHUMT00000039067.1 | 673 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| FDPS-005 | OTTHUMT00000039057.1 | 2017 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| FDPS-012 | OTTHUMT00000039064.1 | 1022 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| FDPS-011 | OTTHUMT00000039063.1 | 976 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| FDPS-014 | OTTHUMT00000039066.1 | 808 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| FDPS-017 | OTTHUMT00000039069.1 | 680 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| FDPS-013 | OTTHUMT00000039065.1 | 630 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| FDPS-016 | OTTHUMT00000039068.1 | 554 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| FDPS-018 | OTTHUMT00000039070.1 | 475 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
