Description
actin binding LIM protein 1
Synonyms
abLIM, limatin
Location
Chromosome 10: 114,431,113-114,685,003 reverse strand.
VEGA68:CM000672.2
About this gene
This gene has 12 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ABLIM1-002 | OTTHUMT00000050470.4 | 7408 | 718aa | OTTHUMP00000020531 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31288 | - | |
| ABLIM1-009 | OTTHUMT00000050477.2 | 6841 | 455aa | OTTHUMP00000020536 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31289 | - | |
| ABLIM1-005 | OTTHUMT00000467746.2 | 3203 | 748aa | OTTHUMP00000272285 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81509 | - | |
| ABLIM1-001 | OTTHUMT00000050469.3 | 2657 | 778aa | OTTHUMP00000020530 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7590 | O14639 | |
| ABLIM1-010 | OTTHUMT00000050478.3 | 2255 | 401aa | OTTHUMP00000020537 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81508 | - | |
| ABLIM1-011 | OTTHUMT00000050479.2 | 854 | 173aa | OTTHUMP00000020538 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| ABLIM1-012 | OTTHUMT00000050480.1 | 541 | 172aa | OTTHUMP00000020539 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ABLIM1-004 | OTTHUMT00000050472.4 | 2237 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| ABLIM1-007 | OTTHUMT00000050475.1 | 356 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ABLIM1-006 | OTTHUMT00000050474.1 | 518 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ABLIM1-013 | OTTHUMT00000050481.1 | 498 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ABLIM1-014 | OTTHUMT00000050482.1 | 448 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
