Description
glioblastoma amplified sequence
Synonyms
NIPSNAP2
Location
Chromosome 7: 55,951,793-56,000,181 forward strand.
VEGA68:CM000669.2
About this gene
This gene has 11 transcripts (splice variants), 3 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| GBAS-001 | OTTHUMT00000251524.1 | 1999 | 286aa | OTTHUMP00000159734 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5521 | O75323 | |
| GBAS-002 | OTTHUMT00000343274.1 | 1882 | 247aa | OTTHUMP00000209309 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56488 | - | |
| GBAS-004 | OTTHUMT00000343276.2 | 818 | 80aa | OTTHUMP00000209310 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GBAS-005 | OTTHUMT00000343277.2 | 662 | 65aa | OTTHUMP00000209311 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| GBAS-011 | OTTHUMT00000343283.1 | 872 | 114aa | OTTHUMP00000209313 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| GBAS-007 | OTTHUMT00000343279.1 | 660 | 145aa | OTTHUMP00000209312 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| GBAS-006 | OTTHUMT00000343278.1 | 494 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GBAS-008 | OTTHUMT00000343280.1 | 250 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GBAS-003 | OTTHUMT00000343275.1 | 4255 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| GBAS-010 | OTTHUMT00000343282.1 | 573 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| GBAS-009 | OTTHUMT00000343281.1 | 497 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
