Description
methyl CpG binding protein 2 (Rett syndrome)
Location
Chromosome X: 154,021,573-154,137,103 reverse strand.
VEGA68:CM000685.2
About this gene
This gene has 26 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| MECP2-001 | OTTHUMT00000061144.1 | 10505 | 486aa | OTTHUMP00000026021 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS14741 | P51608 | |
| MECP2-002 | OTTHUMT00000061145.4 | 1729 | 498aa | OTTHUMP00000064436 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS48193 | A0A140VKC4 | |
| MECP2-005 | OTTHUMT00000129558.5 | 1712 | 172aa | OTTHUMP00000199821 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B5MCB4 | |
| MECP2-019 | OTTHUMT00000480438.1 | 1174 | 184aa | OTTHUMP00000278373 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B5MCB4 | |
| MECP2-008 | OTTHUMT00000289804.3 | 413 | 49aa | OTTHUMP00000184911 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECP2-017 | OTTHUMT00000480442.3 | 322 | 41aa | OTTHUMP00000278374 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| MECP2-028 | OTTHUMT00000490919.1 | 159 | 53aa | OTTHUMP00000282879 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GTV0 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| MECP2-009 | OTTHUMT00000480406.1 | 9901 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| MECP2-007 | OTTHUMT00000480407.1 | 5941 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| MECP2-014 | OTTHUMT00000480408.1 | 1052 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| MECP2-003 | OTTHUMT00000061146.4 | 784 | 37aa | OTTHUMP00000198726 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| MECP2-012 | OTTHUMT00000289808.1 | 1298 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-010 | OTTHUMT00000289806.3 | 1198 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-011 | OTTHUMT00000289807.2 | 1088 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-020 | OTTHUMT00000480440.1 | 835 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-018 | OTTHUMT00000480443.1 | 581 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-015 | OTTHUMT00000480439.1 | 490 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-021 | OTTHUMT00000480441.1 | 350 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-006 | OTTHUMT00000258053.3 | 342 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-022 | OTTHUMT00000490920.1 | 140 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-023 | OTTHUMT00000490925.1 | 101 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-027 | OTTHUMT00000490921.1 | 101 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-026 | OTTHUMT00000490922.1 | 100 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| MECP2-004 | OTTHUMT00000061147.3 | 2907 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MECP2-016 | OTTHUMT00000480444.1 | 2558 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| MECP2-013 | OTTHUMT00000289809.1 | 436 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
