Description
galactosylceramidase
Location
Chromosome 14: 87,837,820-87,993,665 reverse strand.
VEGA68:CM000676.2
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| GALC-001 | OTTHUMT00000071559.2 | 3883 | 685aa | OTTHUMP00000027906 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9878 | P54803 | |
| GALC-002 | OTTHUMT00000410094.1 | 2547 | 659aa | OTTHUMP00000244263 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55937 | - | |
| GALC-005 | OTTHUMT00000410096.1 | 2054 | 662aa | OTTHUMP00000244264 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55936 | - | |
| GALC-007 | OTTHUMT00000410093.1 | 2528 | 589aa | OTTHUMP00000244262 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| GALC-017 | OTTHUMT00000474323.1 | 1221 | 404aa | OTTHUMP00000274944 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WX10 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| GALC-004 | OTTHUMT00000410095.1 | 2276 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| GALC-008 | OTTHUMT00000410092.1 | 2067 | 434aa | OTTHUMP00000244261 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V255 | |
| GALC-006 | OTTHUMT00000410098.1 | 1874 | 211aa | OTTHUMP00000244266 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V5E8 | |
| GALC-009 | OTTHUMT00000410103.1 | 717 | 112aa | OTTHUMP00000244267 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V4M2 | |
| GALC-010 | OTTHUMT00000410104.1 | 595 | 62aa | OTTHUMP00000244268 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YJV6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| GALC-014 | OTTHUMT00000410097.1 | 554 | 72aa | OTTHUMP00000244265 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YJG8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| GALC-011 | OTTHUMT00000410101.1 | 631 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GALC-012 | OTTHUMT00000410102.1 | 567 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GALC-016 | OTTHUMT00000410099.1 | 408 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| GALC-003 | OTTHUMT00000071561.2 | 1263 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| GALC-013 | OTTHUMT00000410100.1 | 605 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| GALC-015 | OTTHUMT00000410105.1 | 525 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
