Description
jagged 1
Synonyms
HJ1, AHD, CD339, AWS
Location
Chromosome 20: 10,637,684-10,674,107 reverse strand.
VEGA68:CM000682.2
About this gene
This gene has 11 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| JAG1-002 | OTTHUMT00000077998.3 | 6048 | 1218aa | OTTHUMP00000274627 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13112 | P78504 | |
| JAG1-003 | OTTHUMT00000473622.1 | 597 | 172aa | OTTHUMP00000274628 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WXH5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| JAG1-006 | OTTHUMT00000473626.1 | 3723 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| JAG1-005 | OTTHUMT00000473618.1 | 1590 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| JAG1-008 | OTTHUMT00000473623.1 | 507 | 74aa | OTTHUMP00000274629 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087X1E8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| JAG1-004 | OTTHUMT00000473617.1 | 3758 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| JAG1-011 | OTTHUMT00000473620.1 | 1161 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| JAG1-007 | OTTHUMT00000473625.1 | 837 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| JAG1-009 | OTTHUMT00000473624.1 | 756 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| JAG1-010 | OTTHUMT00000473621.1 | 586 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| JAG1-013 | OTTHUMT00000473619.1 | 580 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
