Description
protein tyrosine phosphatase, receptor type, C
Synonyms
T200, LCA, GP180
Location
Chromosome 1: 198,638,671-198,757,283 forward strand.
VEGA68:CM000663.2
About this gene
This gene has 14 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PTPRC-001 | OTTHUMT00000086814.4 | 5164 | 1306aa | OTTHUMP00000033813 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1397 | A0A0A0MT22 | |
| PTPRC-002 | OTTHUMT00000098488.3 | 4626 | 1145aa | OTTHUMP00000038574 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS1398 | X6R433 | |
| PTPRC-009 | OTTHUMT00000086822.3 | 1338 | 87aa | OTTHUMP00000033819 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44291 | - | |
| PTPRC-005 | OTTHUMT00000086818.7 | 2291 | 735aa | OTTHUMP00000033817 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M3ZCP1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PTPRC-006 | OTTHUMT00000086819.4 | 1962 | 600aa | OTTHUMP00000033818 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PKH0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PTPRC-004 | OTTHUMT00000086817.3 | 1017 | 36aa | OTTHUMP00000033816 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PTPRC-011 | OTTHUMT00000086815.5 | 517 | 148aa | OTTHUMP00000033814 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A140TA57 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PTPRC-003 | OTTHUMT00000086816.4 | 462 | 118aa | OTTHUMP00000033815 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PTPRC-010 | OTTHUMT00000098489.6 | 2336 | 753aa | OTTHUMP00000270611 | Non stop decay | - | A0A075B788 | |
| PTPRC-014 | OTTHUMT00000382385.1 | 408 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PTPRC-013 | OTTHUMT00000382384.1 | 264 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PTPRC-007 | OTTHUMT00000086820.3 | 926 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PTPRC-008 | OTTHUMT00000086821.2 | 648 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PTPRC-012 | OTTHUMT00000098707.1 | 612 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
