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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (6)
- Orthologues
- Alt. alleles
Ontologies
Gene expression
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Gene: TFPT OTTHUMG00000065906

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Description

TCF3 (E2A) fusion partner (in childhood Leukemia)

Synonyms

FB1, amida, INO80F

Location

Chromosome 19: 54,107,013-54,115,675 reverse strand.

VEGA68:CM000681.2

About this gene

This gene has 6 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TFPT-003	OTTHUMT00000141215.4	1205	253aa	OTTHUMP00000071104	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12878	A0A024R4Q5
TFPT-002	OTTHUMT00000141214.3	804	244aa	OTTHUMP00000194971	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS82396	G5E9B5
TFPT-005	OTTHUMT00000141299.2	774	193aa	OTTHUMP00000194972	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A8MTQ3
TFPT-001	OTTHUMT00000141187.4	1069	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TFPT-004	OTTHUMT00000141298.2	783	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TFPT-006	OTTHUMT00000336874.2	737	105aa	OTTHUMP00000206567	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WDC1

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Summary

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Gene-based displays