Description
cathepsin B
Location
Chromosome 8: 11,842,524-11,869,448 reverse strand.
VEGA68:CM000670.2
About this gene
This gene has 36 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CTSB-001 | OTTHUMT00000207586.3 | 3875 | 339aa | OTTHUMP00000116009 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5986 | A0A024R374 | |
| CTSB-007 | OTTHUMT00000383692.1 | 2028 | 339aa | OTTHUMP00000229514 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5986 | A0A024R374 | |
| CTSB-006 | OTTHUMT00000383690.1 | 2011 | 339aa | OTTHUMP00000229512 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5986 | A0A024R374 | |
| CTSB-002 | OTTHUMT00000383693.1 | 2009 | 339aa | OTTHUMP00000229515 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5986 | A0A024R374 | |
| CTSB-005 | OTTHUMT00000383694.1 | 1989 | 339aa | OTTHUMP00000229516 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5986 | A0A024R374 | |
| CTSB-004 | OTTHUMT00000383688.1 | 1436 | 339aa | OTTHUMP00000229511 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5986 | A0A024R374 | |
| CTSB-003 | OTTHUMT00000383687.2 | 1389 | 339aa | OTTHUMP00000229510 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS5986 | A0A024R374 | |
| CTSB-017 | OTTHUMT00000383698.3 | 975 | 170aa | OTTHUMP00000229662 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PSG5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-023 | OTTHUMT00000383710.1 | 764 | 70aa | OTTHUMP00000229526 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PKX0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-015 | OTTHUMT00000383697.2 | 633 | 175aa | OTTHUMP00000229517 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PQM1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-021 | OTTHUMT00000383702.2 | 580 | 143aa | OTTHUMP00000229521 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PNL5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-016 | OTTHUMT00000383707.2 | 573 | 98aa | OTTHUMP00000229524 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PR54 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-030 | OTTHUMT00000383751.2 | 573 | 70aa | OTTHUMP00000229557 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PKX0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-024 | OTTHUMT00000383712.4 | 570 | 20aa | OTTHUMP00000229668 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-019 | OTTHUMT00000383699.2 | 561 | 165aa | OTTHUMP00000229518 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PLY3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-020 | OTTHUMT00000383701.1 | 560 | 148aa | OTTHUMP00000229520 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PHZ5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-027 | OTTHUMT00000383704.2 | 559 | 136aa | OTTHUMP00000229523 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PKQ7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-013 | OTTHUMT00000383708.2 | 557 | 92aa | OTTHUMP00000229525 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PS78 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-032 | OTTHUMT00000383918.2 | 556 | 55aa | OTTHUMP00000229666 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PIS1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-014 | OTTHUMT00000383713.3 | 545 | 68aa | OTTHUMP00000272049 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PL32 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-033 | OTTHUMT00000383917.2 | 540 | 101aa | OTTHUMP00000229664 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PJ67 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-018 | OTTHUMT00000383703.2 | 524 | 143aa | OTTHUMP00000229522 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PNL5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-025 | OTTHUMT00000383711.3 | 368 | 32aa | OTTHUMP00000229667 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CTSB-010 | OTTHUMT00000383689.1 | 7712 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CTSB-012 | OTTHUMT00000383696.1 | 1012 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CTSB-008 | OTTHUMT00000383695.1 | 1003 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CTSB-011 | OTTHUMT00000383691.1 | 1855 | 110aa | OTTHUMP00000229513 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PCB3 | |
| CTSB-042 | OTTHUMT00000468131.1 | 660 | 76aa | OTTHUMP00000272437 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | R4GMQ5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CTSB-026 | OTTHUMT00000383700.1 | 550 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CTSB-038 | OTTHUMT00000383913.1 | 498 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CTSB-039 | OTTHUMT00000383911.1 | 430 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CTSB-037 | OTTHUMT00000383914.1 | 399 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CTSB-041 | OTTHUMT00000384190.1 | 2230 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSB-036 | OTTHUMT00000383912.1 | 839 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSB-035 | OTTHUMT00000383916.1 | 693 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CTSB-034 | OTTHUMT00000383915.1 | 586 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
