Description
RNA binding motif protein 47
Synonyms
FLJ20273, NET18
Location
Chromosome 4: 40,423,267-40,630,875 reverse strand.
VEGA68:CM000666.2
About this gene
This gene has 16 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RBM47-001 | OTTHUMT00000250456.2 | 4816 | 593aa | OTTHUMP00000158755 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43223 | A0AV96 | |
| RBM47-002 | OTTHUMT00000250457.2 | 4473 | 524aa | OTTHUMP00000158756 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3460 | - | |
| RBM47-006 | OTTHUMT00000362029.1 | 4056 | 593aa | OTTHUMP00000218859 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43223 | A0AV96 | |
| RBM47-005 | OTTHUMT00000362028.1 | 2419 | 555aa | OTTHUMP00000218858 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B7Z8Z7 | |
| RBM47-011 | OTTHUMT00000362034.2 | 1100 | 217aa | OTTHUMP00000218864 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RBS9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RBM47-015 | OTTHUMT00000362038.2 | 882 | 193aa | OTTHUMP00000218868 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6REZ6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RBM47-009 | OTTHUMT00000362032.2 | 856 | 158aa | OTTHUMP00000218862 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6R9M7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RBM47-008 | OTTHUMT00000362031.2 | 836 | 113aa | OTTHUMP00000218861 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RBP6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RBM47-013 | OTTHUMT00000362036.2 | 797 | 137aa | OTTHUMP00000218866 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RFL5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RBM47-010 | OTTHUMT00000362033.2 | 741 | 59aa | OTTHUMP00000218863 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RBM47-012 | OTTHUMT00000362035.1 | 657 | 59aa | OTTHUMP00000218865 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| RBM47-014 | OTTHUMT00000362037.2 | 582 | 123aa | OTTHUMP00000218867 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RA49 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RBM47-003 | OTTHUMT00000362027.1 | 2056 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RBM47-007 | OTTHUMT00000362030.1 | 4951 | 393aa | OTTHUMP00000218860 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6R9D6 | |
| RBM47-016 | OTTHUMT00000362042.1 | 229 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RBM47-004 | OTTHUMT00000362114.1 | 2118 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
