Description
HOP homeobox
Synonyms
SMAP31, OB1, HOP, NECC1, LAGY
Location
Chromosome 4: 56,647,988-56,681,899 reverse strand.
VEGA68:CM000666.2
About this gene
This gene has 18 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| HOPX-003 | OTTHUMT00000250689.5 | 1611 | 73aa | OTTHUMP00000158970 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3507 | Q9BPY8 | |
| HOPX-014 | OTTHUMT00000410775.3 | 1543 | 91aa | OTTHUMP00000244623 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47062 | - | |
| HOPX-001 | OTTHUMT00000362355.4 | 1248 | 73aa | OTTHUMP00000219002 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3507 | Q9BPY8 | |
| HOPX-017 | OTTHUMT00000410772.1 | 1164 | 73aa | OTTHUMP00000244620 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3507 | Q9BPY8 | |
| HOPX-016 | OTTHUMT00000410773.1 | 1139 | 73aa | OTTHUMP00000244621 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3507 | Q9BPY8 | |
| HOPX-015 | OTTHUMT00000410774.1 | 1138 | 73aa | OTTHUMP00000244622 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3507 | Q9BPY8 | |
| HOPX-006 | OTTHUMT00000362354.3 | 1129 | 73aa | OTTHUMP00000219001 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3507 | Q9BPY8 | |
| HOPX-009 | OTTHUMT00000362357.1 | 1064 | 73aa | OTTHUMP00000219004 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3507 | Q9BPY8 | |
| HOPX-010 | OTTHUMT00000362358.3 | 1001 | 73aa | OTTHUMP00000219005 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3507 | Q9BPY8 | |
| HOPX-007 | OTTHUMT00000476273.1 | 904 | 73aa | OTTHUMP00000275467 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3507 | Q9BPY8 | |
| HOPX-008 | OTTHUMT00000362356.3 | 1141 | 94aa | OTTHUMP00000219003 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| HOPX-002 | OTTHUMT00000250688.4 | 1288 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HOPX-005 | OTTHUMT00000362353.4 | 1246 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HOPX-012 | OTTHUMT00000410771.1 | 1160 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HOPX-013 | OTTHUMT00000410770.1 | 1116 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| HOPX-011 | OTTHUMT00000470092.1 | 577 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| HOPX-004 | OTTHUMT00000470091.1 | 3203 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| HOPX-018 | OTTHUMT00000470093.1 | 2540 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
