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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
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Gene: LIN54 OTTHUMG00000130287

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Description

lin-54 homolog (C. elegans)

Synonyms

DKFZp686L1814, MIP120, CXCDC1, TCX1, JC8.6

Location

Chromosome 4: 82,909,973-83,012,926 reverse strand.

VEGA68:CM000666.2

About this gene

This gene has 10 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LIN54-001	OTTHUMT00000252626.2	6127	749aa	OTTHUMP00000160794	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3599	Q6MZP7
LIN54-006	OTTHUMT00000363086.1	4254	528aa	OTTHUMP00000219382	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47089	-
LIN54-004	OTTHUMT00000363084.1	4083	528aa	OTTHUMP00000219380	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47089	-
LIN54-008	OTTHUMT00000363088.1	2757	660aa	OTTHUMP00000219384	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS75157	-
LIN54-003	OTTHUMT00000363083.1	2742	749aa	OTTHUMP00000219379	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3599	Q6MZP7
LIN54-002	OTTHUMT00000363082.1	2257	528aa	OTTHUMP00000219378	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47089	-
LIN54-005	OTTHUMT00000363085.1	4507	62aa	OTTHUMP00000219381	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LIN54-007	OTTHUMT00000363087.1	2684	243aa	OTTHUMP00000219383	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LIN54-009	OTTHUMT00000363089.1	810	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LIN54-010	OTTHUMT00000363090.1	729	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Summary

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Gene-based displays