Description
cadherin-related family member 5
Synonyms
MU-PCDH, FLJ20219
Location
Chromosome 11: 616,577-626,078 reverse strand.
VEGA68:CM000673.2
About this gene
This gene has 10 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CDHR5-001 | OTTHUMT00000255023.2 | 3635 | 845aa | OTTHUMP00000162884 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7707 | Q9HBB8 | |
| CDHR5-002 | OTTHUMT00000255024.3 | 2318 | 651aa | OTTHUMP00000162885 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS7708 | - | |
| CDHR5-008 | OTTHUMT00000383578.3 | 625 | 190aa | OTTHUMP00000229480 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PLX6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CDHR5-007 | OTTHUMT00000383579.2 | 550 | 165aa | OTTHUMP00000229437 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PPW2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CDHR5-006 | OTTHUMT00000383580.2 | 496 | 15aa | OTTHUMP00000229438 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CDHR5-003 | OTTHUMT00000383574.1 | 2038 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CDHR5-004 | OTTHUMT00000383575.2 | 2816 | 106aa | OTTHUMP00000229479 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PMY2 | |
| CDHR5-010 | OTTHUMT00000383631.1 | 427 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CDHR5-009 | OTTHUMT00000383577.1 | 408 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CDHR5-005 | OTTHUMT00000383576.1 | 1311 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
