Description
protein kinase, interferon-inducible double stranded RNA dependent activator
Synonyms
PACT, DYT16, RAX, HSD14
Location
Chromosome 2: 178,431,414-178,451,512 reverse strand.
VEGA68:CM000664.2
About this gene
This gene has 12 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PRKRA-001 | OTTHUMT00000255782.2 | 1826 | 313aa | OTTHUMP00000163394 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2279 | O75569 | |
| PRKRA-009 | OTTHUMT00000335172.24 | 1344 | 302aa | OTTHUMP00000205652 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46460 | - | |
| PRKRA-003 | OTTHUMT00000335166.2 | 1211 | 288aa | OTTHUMP00000225032 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46461 | - | |
| PRKRA-008 | OTTHUMT00000335171.2 | 942 | 108aa | OTTHUMP00000205651 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JMM3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| PRKRA-002 | OTTHUMT00000335165.1 | 1616 | 105aa | OTTHUMP00000205650 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G5E9Q4 | |
| PRKRA-011 | OTTHUMT00000335174.1 | 549 | 95aa | OTTHUMP00000205653 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8WEG8 | |
| PRKRA-005 | OTTHUMT00000335168.2 | 550 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PRKRA-010 | OTTHUMT00000335173.1 | 461 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PRKRA-004 | OTTHUMT00000335167.1 | 1851 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRKRA-012 | OTTHUMT00000335175.1 | 796 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRKRA-007 | OTTHUMT00000335170.1 | 585 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRKRA-006 | OTTHUMT00000335169.1 | 541 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
