Description
PR domain containing 5
Synonyms
PFM2
Location
Chromosome 4: 120,684,919-120,922,870 reverse strand.
VEGA68:CM000666.2
About this gene
This gene has 12 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PRDM5-001 | OTTHUMT00000256528.2 | 5330 | 630aa | OTTHUMP00000163922 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3716 | Q9NQX1 | |
| PRDM5-006 | OTTHUMT00000363931.1 | 2338 | 599aa | OTTHUMP00000219784 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS75188 | - | |
| PRDM5-005 | OTTHUMT00000363930.1 | 2259 | 501aa | OTTHUMP00000219783 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS75187 | - | |
| PRDM5-002 | OTTHUMT00000363927.1 | 2492 | 111aa | OTTHUMP00000219782 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PRDM5-009 | OTTHUMT00000363934.1 | 1044 | 145aa | OTTHUMP00000219785 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0Y9S1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PRDM5-011 | OTTHUMT00000363936.1 | 696 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PRDM5-007 | OTTHUMT00000363932.1 | 576 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PRDM5-012 | OTTHUMT00000363937.1 | 210 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PRDM5-004 | OTTHUMT00000363929.1 | 2396 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRDM5-003 | OTTHUMT00000363928.1 | 1249 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRDM5-010 | OTTHUMT00000363935.1 | 847 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PRDM5-008 | OTTHUMT00000363933.1 | 535 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
