Description
U6 snRNA biogenesis 1
Synonyms
Mpn1, HVSL1, FLJ13154
Location
Chromosome 16: 57,999,546-58,021,618 forward strand.
VEGA68:CM000678.2
About this gene
This gene has 18 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| USB1-001 | OTTHUMT00000257331.3 | 2282 | 265aa | OTTHUMP00000164660 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10791 | A0A024R6V6 | |
| USB1-003 | OTTHUMT00000429953.1 | 1751 | 163aa | OTTHUMP00000253650 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81990 | H3BN52 | |
| USB1-004 | OTTHUMT00000429948.1 | 1217 | 186aa | OTTHUMP00000253649 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55997 | - | |
| USB1-002 | OTTHUMT00000429947.1 | 1212 | 247aa | OTTHUMP00000253648 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55998 | - | |
| USB1-012 | OTTHUMT00000429946.1 | 1135 | 214aa | OTTHUMP00000253647 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS81991 | H3BNM8 | |
| USB1-014 | OTTHUMT00000429974.2 | 671 | 182aa | OTTHUMP00000253661 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BTT8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| USB1-008 | OTTHUMT00000429951.1 | 976 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| USB1-007 | OTTHUMT00000429950.1 | 937 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| USB1-015 | OTTHUMT00000429978.1 | 558 | 95aa | OTTHUMP00000253662 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| USB1-017 | OTTHUMT00000429975.1 | 719 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| USB1-016 | OTTHUMT00000429976.1 | 573 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| USB1-018 | OTTHUMT00000429977.1 | 562 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| USB1-009 | OTTHUMT00000429952.1 | 548 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| USB1-013 | OTTHUMT00000429979.1 | 464 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| USB1-005 | OTTHUMT00000429956.1 | 3888 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| USB1-011 | OTTHUMT00000429955.1 | 886 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| USB1-010 | OTTHUMT00000429949.1 | 575 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| USB1-006 | OTTHUMT00000429954.1 | 2895 | No protein | - | TEC | - | - |
