Description
cadherin 5, type 2 (vascular endothelium)
Synonyms
CD144, 7B4
Location
Chromosome 16: 66,366,630-66,404,786 forward strand.
VEGA68:CM000678.2
About this gene
This gene has 9 transcripts (splice variants), 22 orthologues and 21 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CDH5-001 | OTTHUMT00000268767.2 | 4120 | 784aa | OTTHUMP00000174777 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10804 | P33151 | |
| CDH5-007 | OTTHUMT00000421000.2 | 1932 | 406aa | OTTHUMP00000256665 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | I3L1J2 | |
| CDH5-002 | OTTHUMT00000421001.2 | 1672 | 223aa | OTTHUMP00000256666 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B4DTR2 | |
| CDH5-005 | OTTHUMT00000420996.3 | 615 | 131aa | OTTHUMP00000249839 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BPG1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CDH5-003 | OTTHUMT00000420998.4 | 591 | 17aa | OTTHUMP00000254121 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CDH5-004 | OTTHUMT00000420997.4 | 459 | 76aa | OTTHUMP00000249840 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BR64 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CDH5-009 | OTTHUMT00000420993.1 | 2671 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CDH5-010 | OTTHUMT00000420995.1 | 2442 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CDH5-008 | OTTHUMT00000420994.2 | 2138 | 110aa | OTTHUMP00000249838 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BR11 |
