This is an archived version of Vega. Click here for more information.

Human

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: CKLF OTTHUMG00000137504

.

Description

chemokine-like factor

Synonyms

C32, CKLF4, CKLF3, UCK-1, HSPC224

Location

Chromosome 16: 66,552,563-66,566,251 forward strand.

VEGA68:CM000678.2

About this gene

This gene has 8 transcripts (splice variants), 3 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CKLF-001	OTTHUMT00000268816.2	669	152aa	OTTHUMP00000174791	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10807	Q9UBR5
CKLF-005	OTTHUMT00000393188.1	628	113aa	OTTHUMP00000235182	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45502	-
CKLF-003	OTTHUMT00000268818.1	571	120aa	OTTHUMP00000174793	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10809	-
CKLF-002	OTTHUMT00000268817.1	508	99aa	OTTHUMP00000174792	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10808	Q5BJH6
CKLF-004	OTTHUMT00000268819.1	412	67aa	OTTHUMP00000174794	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10806	-
CKLF-006	OTTHUMT00000393186.1	546	33aa	OTTHUMP00000235181	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CKLF-009	OTTHUMT00000431068.1	365	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CKLF-007	OTTHUMT00000393187.1	564	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays