Description
solute carrier family 12 (potassium/chloride transporters), member 4
Synonyms
KCC1
Location
Chromosome 16: 67,943,474-67,969,601 reverse strand.
VEGA68:CM000678.2
About this gene
This gene has 19 transcripts (splice variants), 9 orthologues and 5 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SLC12A4-001 | OTTHUMT00000268864.5 | 4765 | 1085aa | OTTHUMP00000174837 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10855 | Q9UP95 | |
| SLC12A4-004 | OTTHUMT00000437611.1 | 3627 | 1054aa | OTTHUMP00000256993 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54031 | - | |
| SLC12A4-005 | OTTHUMT00000437612.1 | 3525 | 1079aa | OTTHUMP00000256994 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54030 | - | |
| SLC12A4-017 | OTTHUMT00000437626.1 | 3768 | 1068aa | OTTHUMP00000256999 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SLC12A4-007 | OTTHUMT00000437610.1 | 3620 | 1037aa | OTTHUMP00000256992 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | I3L4N6 | |
| SLC12A4-008 | OTTHUMT00000437615.3 | 891 | 178aa | OTTHUMP00000259214 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QRE2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SLC12A4-006 | OTTHUMT00000437609.1 | 2518 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SLC12A4-010 | OTTHUMT00000437614.2 | 868 | 54aa | OTTHUMP00000257055 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SLC12A4-014 | OTTHUMT00000437628.4 | 588 | 90aa | OTTHUMP00000259213 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QSF2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SLC12A4-020 | OTTHUMT00000437681.2 | 406 | 19aa | OTTHUMP00000259192 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SLC12A4-003 | OTTHUMT00000437616.1 | 1016 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SLC12A4-018 | OTTHUMT00000437627.2 | 3761 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC12A4-002 | OTTHUMT00000437613.2 | 3649 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC12A4-012 | OTTHUMT00000437631.1 | 847 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC12A4-009 | OTTHUMT00000437617.1 | 673 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC12A4-015 | OTTHUMT00000437633.1 | 633 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC12A4-013 | OTTHUMT00000437630.1 | 573 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC12A4-011 | OTTHUMT00000437632.2 | 515 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SLC12A4-016 | OTTHUMT00000437629.1 | 412 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
