Description
tripartite motif-containing 6
Synonyms
RNF89
Location
Chromosome 11: 5,596,109-5,612,958 forward strand.
VEGA68:CM000673.2
About this gene
This gene has 12 transcripts (splice variants), 56 orthologues and 53 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| TRIM6-003 | OTTHUMT00000143378.3 | 3403 | 516aa | OTTHUMP00000069820 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31389 | Q9C030 | |
| TRIM6-001 | OTTHUMT00000143376.2 | 3217 | 488aa | OTTHUMP00000069818 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS31390 | Q9C030 | |
| TRIM6-004 | OTTHUMT00000143379.3 | 2951 | 313aa | OTTHUMP00000197092 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55738 | - | |
| TRIM6-011 | OTTHUMT00000365871.1 | 1767 | 313aa | OTTHUMP00000220650 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55738 | - | |
| TRIM6-008 | OTTHUMT00000365868.1 | 1398 | 313aa | OTTHUMP00000220648 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55738 | - | |
| TRIM6-009 | OTTHUMT00000365869.1 | 1060 | 313aa | OTTHUMP00000220649 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS55738 | - | |
| TRIM6-002 | OTTHUMT00000143377.1 | 2590 | 462aa | OTTHUMP00000069819 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PFM0 | |
| TRIM6-007 | OTTHUMT00000143382.4 | 468 | 98aa | OTTHUMP00000206421 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| TRIM6-010 | OTTHUMT00000365870.1 | 2783 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| TRIM6-006 | OTTHUMT00000143381.1 | 2482 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TRIM6-012 | OTTHUMT00000365872.1 | 740 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| TRIM6-005 | OTTHUMT00000143380.1 | 1050 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
