Description
sequestosome 1
Synonyms
p62, p62B, p60, A170
Location
Chromosome 5: 179,806,398-179,838,078 forward strand.
VEGA68:CM000667.2
About this gene
This gene has 17 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SQSTM1-001 | OTTHUMT00000319344.1 | 2986 | 440aa | OTTHUMP00000198118 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS34317 | Q13501 | |
| SQSTM1-002 | OTTHUMT00000319345.1 | 2253 | 356aa | OTTHUMP00000198119 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47355 | - | |
| SQSTM1-013 | OTTHUMT00000372426.1 | 1714 | 378aa | OTTHUMP00000223467 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EMC7 | |
| SQSTM1-015 | OTTHUMT00000372445.33 | 842 | 167aa | OTTHUMP00000223469 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PFW8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SQSTM1-003 | OTTHUMT00000319346.75 | 628 | 140aa | OTTHUMP00000198120 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JRJ8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SQSTM1-017 | OTTHUMT00000372462.3 | 602 | 190aa | OTTHUMP00000224082 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E3W990 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SQSTM1-009 | OTTHUMT00000372422.2 | 2241 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SQSTM1-012 | OTTHUMT00000372425.1 | 1734 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SQSTM1-016 | OTTHUMT00000372446.1 | 578 | 69aa | OTTHUMP00000223470 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SQSTM1-008 | OTTHUMT00000319351.2 | 572 | 73aa | OTTHUMP00000198121 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SQSTM1-010 | OTTHUMT00000372423.2 | 2405 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SQSTM1-011 | OTTHUMT00000372424.1 | 1722 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SQSTM1-014 | OTTHUMT00000372444.1 | 921 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SQSTM1-004 | OTTHUMT00000319347.1 | 562 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SQSTM1-005 | OTTHUMT00000319348.1 | 532 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SQSTM1-007 | OTTHUMT00000319350.1 | 808 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SQSTM1-006 | OTTHUMT00000319349.1 | 656 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
